Pseudomonas aeruginosa RP73, M062_26445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00065
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other RP73 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.20 PAS domain - - 345 470 2.4E-28
CDD cd00130 PAS IPR000014 PAS domain 355 457 4.42189E-11
SMART SM00065 gaf_1 IPR003018 GAF domain 192 343 5.2E-9
SMART SM00086 pac_2 IPR001610 PAC motif 418 460 8.1E-7
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 352 458 3.22E-22
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 467 628 7.5E-35
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 476 630 1.1E-43
Pfam PF13426 PAS domain IPR000014 PAS domain 358 459 1.4E-14
Pfam PF00563 EAL domain IPR001633 EAL domain 646 880 6.6E-78
SMART SM00267 duf1_3 IPR000160 GGDEF domain 460 629 1.7E-56
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 166 342 3.9E-18
Pfam PF01590 GAF domain IPR003018 GAF domain 193 332 8.0E-13
SMART SM00052 duf2_2 IPR001633 EAL domain 639 885 2.7E-123
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 471 641 1.9E-51
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 471 624 1.7E-39
SUPERFAMILY SSF55781 GAF domain-like - - 195 335 3.05E-19
SMART SM00091 pas_2 IPR000014 PAS domain 346 412 3.8E-6
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 644 892 8.11E-92
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 642 894 1.2E-103
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 640 894 1.9E-101
CDD cd01949 GGDEF IPR000160 GGDEF domain 472 627 7.60308E-55
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 134 885 0.0
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 346 466 3.9E-17
SMART SM00091 pas_2 IPR000014 PAS domain 24 87 59.0
CDD cd01948 EAL IPR001633 EAL domain 645 884 2.79868E-103

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.