Pseudomonas aeruginosa RP73, M062_26470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00924
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01246
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other RP73 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil 402 429 -
Coils Coil 75 102 -
SUPERFAMILY SSF82861 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 830 914 2.22E-7
Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 IPR025692 Mechanosensitive ion channel inner membrane domain 1 493 812 1.7E-105
ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. IPR006686 Mechanosensitive ion channel MscS, conserved site 945 979 -
SUPERFAMILY SSF50182 IPR010920 LSM domain superfamily 916 981 4.58E-17
Gene3D G3DSA:2.30.30.60 IPR023408 Mechanosensitive ion channel MscS domain superfamily 931 980 1.1E-13
MobiDBLite mobidb-lite consensus disorder prediction 250 271 -
Pfam PF12795 Mechanosensitive ion channel porin domain IPR024393 Mechanosensitive ion channel MscS, porin domain 37 273 1.9E-56
MobiDBLite mobidb-lite consensus disorder prediction 1095 1118 -
Pfam PF00924 Mechanosensitive ion channel IPR006685 Mechanosensitive ion channel MscS 873 1071 1.4E-51
Coils Coil 229 252 -
SUPERFAMILY SSF82689 IPR011066 Mechanosensitive ion channel MscS, C-terminal 983 1083 3.79E-21
Gene3D G3DSA:3.30.70.100 984 1077 1.7E-16
Coils Coil 293 327 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.