Pseudomonas aeruginosa RP73, M062_28725
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016779 | nucleotidyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF01050
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0000271 | polysaccharide biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01479
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009058 | biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF00483
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0005976 | polysaccharide metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF01050
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | prp00520 | Amino sugar and nucleotide sugar metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | prp01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | prp00051 | Fructose and mannose metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | prp01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | prp02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| FunFam | G3DSA:3.90.550.10:FF:000046 | Mannose-1-phosphate guanylyltransferase (GDP) | - | - | 2 | 358 | 5.1E-126 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | IPR014710 | RmlC-like jelly roll fold | 355 | 461 | 1.4E-16 |
| Coils | Coil | Coil | - | - | 345 | 365 | - |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | IPR011051 | RmlC-like cupin domain superfamily | 189 | 477 | 4.12E-77 |
| NCBIfam | TIGR01479 | JCVI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | IPR006375 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | 2 | 477 | 0.0 |
| Pfam | PF00483 | Nucleotidyl transferase | IPR005835 | Nucleotidyl transferase domain | 4 | 289 | 1.5E-51 |
| CDD | cd02213 | cupin_PMI_typeII_C | - | - | 344 | 471 | 1.40211E-67 |
| Pfam | PF01050 | Mannose-6-phosphate isomerase | IPR001538 | Mannose-6-phosphate isomerase, type II, C-terminal | 323 | 473 | 2.1E-67 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | IPR029044 | Nucleotide-diphospho-sugar transferases | 2 | 286 | 4.16E-65 |
| PANTHER | PTHR46390 | MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE | - | - | 2 | 472 | 0.0 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | IPR029044 | Nucleotide-diphospho-sugar transferases | 2 | 354 | 1.7E-114 |
| FunFam | G3DSA:2.60.120.10:FF:000032 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | - | - | 355 | 472 | 4.0E-54 |
| CDD | cd02509 | GDP-M1P_Guanylyltransferase | - | - | 2 | 285 | 4.64494E-119 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.