Pseudomonas entomophila L48, PSEEN0412

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 38 255 2.3E-40
CDD cd00130 PAS IPR000014 PAS domain 330 422 1.87311E-6
SUPERFAMILY SSF55785 IPR035965 PAS domain superfamily 687 794 8.72E-26
SUPERFAMILY SSF55073 IPR029787 Nucleotide cyclase 812 969 1.26E-51
Pfam PF00563 EAL domain IPR001633 EAL domain 985 1219 4.7E-74
Gene3D G3DSA:3.40.190.10 122 216 3.4E-70
CDD cd01007 PBP2_BvgS_HisK_like 35 254 2.31779E-79
Coils Coil 1085 1105 -
TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein IPR000014 PAS domain 435 556 1.2E-11
Gene3D G3DSA:3.30.70.270 806 981 9.6E-63
Pfam PF13426 PAS domain IPR000014 PAS domain 693 794 2.1E-14
TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein IPR000014 PAS domain 559 681 1.2E-15
ProSiteProfiles PS50112 PAS repeat profile. IPR000014 PAS domain 680 726 11.906
SMART SM00091 IPR000014 PAS domain 682 748 6.2E-7
Gene3D G3DSA:3.30.450.20 557 672 5.8E-21
CDD cd00130 PAS IPR000014 PAS domain 447 546 1.71075E-4
ProSiteProfiles PS50887 GGDEF domain profile. IPR000160 GGDEF domain 837 970 35.513
SUPERFAMILY SSF53850 38 255 2.05E-50
SUPERFAMILY SSF141868 IPR035919 EAL domain superfamily 983 1232 8.37E-89
Gene3D G3DSA:3.30.450.20 427 546 2.3E-19
Pfam PF08447 PAS fold IPR013655 PAS fold-3 336 410 2.6E-10
Gene3D G3DSA:3.30.450.20 320 426 6.2E-21
SMART SM00086 IPR001610 PAC motif 509 549 0.19
ProSiteProfiles PS50113 PAC domain profile. IPR000700 PAS-associated, C-terminal 753 805 10.268
Pfam PF13426 PAS domain IPR000014 PAS domain 571 673 8.1E-8
CDD cd01948 EAL IPR001633 EAL domain 984 1224 6.46349E-103
CDD cd00130 PAS IPR000014 PAS domain 691 793 3.10096E-11
Gene3D G3DSA:3.20.20.450 IPR035919 EAL domain superfamily 982 1231 2.1E-101
SMART SM00267 IPR000160 GGDEF domain 796 968 2.0E-68
TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 803 967 1.8E-44
SUPERFAMILY SSF55785 IPR035965 PAS domain superfamily 422 546 8.22E-18
ProSiteProfiles PS50113 PAC domain profile. IPR000700 PAS-associated, C-terminal 508 558 8.753
Pfam PF13426 PAS domain IPR000014 PAS domain 449 547 4.0E-6
SMART SM00091 IPR000014 PAS domain 311 379 2.7E-6
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 807 964 6.4E-52
SMART SM00062 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 37 257 4.8E-36
SMART SM00052 IPR001633 EAL domain 978 1224 1.2E-116
CDD cd01949 GGDEF IPR000160 GGDEF domain 808 965 6.54078E-67
ProSiteProfiles PS50112 PAS repeat profile. IPR000014 PAS domain 309 366 11.423
SMART SM00086 IPR001610 PAC motif 634 674 5.2E-5
TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein IPR000014 PAS domain 307 432 3.0E-13
ProSiteProfiles PS50113 PAC domain profile. IPR000700 PAS-associated, C-terminal 384 434 10.454
ProSiteProfiles PS50883 EAL domain profile. IPR001633 EAL domain 979 1233 79.651
SUPERFAMILY SSF55785 IPR035965 PAS domain superfamily 296 423 1.48E-19
SUPERFAMILY SSF55785 IPR035965 PAS domain superfamily 546 672 7.57E-21
Gene3D G3DSA:3.30.450.20 676 805 1.9E-34
TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein IPR000014 PAS domain 686 803 1.5E-19
SMART SM00086 IPR001610 PAC motif 385 425 0.51
Gene3D G3DSA:3.40.190.10 27 253 3.4E-70
SMART SM00091 IPR000014 PAS domain 437 504 0.0015
CDD cd00130 PAS IPR000014 PAS domain 570 671 7.8772E-7
SMART SM00091 IPR000014 PAS domain 561 628 3.8E-4
SMART SM00086 IPR001610 PAC motif 754 796 2.6E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.