Pseudomonas entomophila L48, PSEEN0717
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0007165 | signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pen02030 | Bacterial chemotaxis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pen02020 | Two-component system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Coils | Coil | Coil | - | - | 198 | 218 | - |
| Pfam | PF16591 | Helical bimodular sensor domain | IPR032255 | Helical bimodular sensor domain | 33 | 286 | 1.5E-81 |
| Pfam | PF00015 | Methyl-accepting chemotaxis protein (MCP) signalling domain | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 421 | 605 | 2.7E-46 |
| SMART | SM00283 | MA_2 | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 377 | 638 | 4.0E-91 |
| Gene3D | G3DSA:1.20.1440.210 | - | - | - | 44 | 163 | 1.5E-29 |
| CDD | cd06225 | HAMP | - | - | 313 | 357 | 7.17358E-9 |
| SUPERFAMILY | SSF58104 | Methyl-accepting chemotaxis protein (MCP) signaling domain | - | - | 330 | 639 | 5.62E-81 |
| Gene3D | G3DSA:1.10.287.950 | - | - | - | 309 | 639 | 1.5E-84 |
| Coils | Coil | Coil | - | - | 445 | 465 | - |
| SMART | SM00304 | HAMP_11 | IPR003660 | HAMP domain | 369 | 415 | 20.0 |
| SMART | SM01358 | HBM_sequencesselection_2 | IPR032255 | Helical bimodular sensor domain | 33 | 288 | 7.0E-65 |
| Pfam | PF00672 | HAMP domain | IPR003660 | HAMP domain | 308 | 359 | 1.2E-11 |
| PANTHER | PTHR32089 | METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB | - | - | 174 | 638 | 2.5E-120 |
| FunFam | G3DSA:1.10.287.950:FF:000001 | Methyl-accepting chemotaxis sensory transducer | - | - | 310 | 639 | 2.7E-106 |
| SMART | SM00304 | HAMP_11 | IPR003660 | HAMP domain | 310 | 362 | 1.5E-11 |
| CDD | cd11386 | MCP_signal | - | - | 404 | 617 | 8.34431E-48 |
| Gene3D | G3DSA:1.20.1440.210 | - | - | - | 165 | 283 | 2.2E-26 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.