Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 26 | 37 | 8.1E-7 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 10 | 91 | 1.1E-20 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 166 | 263 | 6.6E-44 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 96 | 296 | 4.89E-38 |
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 11 | 294 | 6.4E-73 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 37 | 47 | 8.1E-7 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 96 | 294 | 7.3E-34 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 8 | 90 | 1.54E-20 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 11 | 69 | 4.4E-18 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 9 | 92 | 1.5E-19 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 47 | 58 | 8.1E-7 |
CDD | cd08432 | PBP2_GcdR_TrpI_HvrB_AmpR_like | - | - | 96 | 290 | 2.50891E-63 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 99 | 290 | 6.6E-44 |