Pseudomonas entomophila L48, PSEEN5130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.420.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pen00230 Purine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pen03030 DNA replication 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pen03440 Homologous recombination 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pen03430 Mismatch repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pen00240 Pyrimidine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pen01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd06127 DEDDh - - 42 202 1.85004E-36
Pfam PF00929 Exonuclease IPR013520 Exonuclease, RNase T/DNA polymerase III 42 200 5.6E-12
Gene3D G3DSA:3.30.420.10 - IPR036397 Ribonuclease H superfamily 32 214 1.8E-29
PANTHER PTHR30231 DNA POLYMERASE III SUBUNIT EPSILON - - 36 223 1.6E-15
SMART SM00479 exoiiiendus IPR013520 Exonuclease, RNase T/DNA polymerase III 40 210 4.9E-15
SUPERFAMILY SSF53098 Ribonuclease H-like IPR012337 Ribonuclease H-like superfamily 35 210 3.56E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.