Pseudomonas entomophila L48, PSEEN5503

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 547 702 1.5E-37
Gene3D G3DSA:3.30.450.20 PAS domain - - 416 550 3.1E-29
Coils Coil Coil - - 712 732 -
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 552 710 2.51E-40
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 719 974 4.5E-104
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 304 416 9.77E-17
CDD cd01949 GGDEF IPR000160 GGDEF domain 548 706 1.08418E-47
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 723 970 3.79E-95
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 427 534 1.92E-22
MobiDBLite mobidb-lite consensus disorder prediction - - 8 22 -
Coils Coil Coil - - 285 305 -
SMART SM00086 pac_2 IPR001610 PAC motif 494 536 0.0046
Pfam PF00563 EAL domain IPR001633 EAL domain 724 958 4.5E-75
Pfam PF08448 PAS fold IPR013656 PAS fold-4 428 538 6.9E-13
CDD cd00130 PAS IPR000014 PAS domain 309 411 3.84332E-5
SMART SM00086 pac_2 IPR001610 PAC motif 371 414 6.9E-8
MobiDBLite mobidb-lite consensus disorder prediction - - 1 22 -
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 294 420 1.6E-9
CDD cd00130 PAS IPR000014 PAS domain 431 533 7.80424E-8
Gene3D G3DSA:3.30.450.20 PAS domain - - 289 410 4.1E-32
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 545 704 7.6E-29
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 419 543 7.0E-16
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 551 717 1.2E-44
CDD cd01948 EAL IPR001633 EAL domain 724 963 8.66054E-116
SMART SM00052 duf2_2 IPR001633 EAL domain 718 963 1.2E-123
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 401 972 0.0
SMART SM00091 pas_2 IPR000014 PAS domain 422 488 1.6E-5
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 719 972 2.1E-95
Pfam PF08447 PAS fold IPR013655 PAS fold-3 325 407 2.9E-18
SMART SM00267 duf1_3 IPR000160 GGDEF domain 536 708 1.3E-48
SMART SM00091 pas_2 IPR000014 PAS domain 297 364 81.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.