Pseudomonas stutzeri A1501, PST_0125 (xcpR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psa03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.90 - - - 167 298 2.3E-50
SUPERFAMILY SSF160246 EspE N-terminal domain-like IPR037257 Type II secretion system protein GspE, N-terminal superfamily 88 152 3.66E-15
Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IPR007831 Type II secretion system protein GspE, N-terminal 83 155 2.0E-7
CDD cd01129 PulE-GspE-like - - 318 464 1.86087E-80
PANTHER PTHR30258 TYPE II SECRETION SYSTEM PROTEIN GSPE-RELATED - - 129 571 0.0
Pfam PF00437 Type II/IV secretion system protein IPR001482 Type II/IV secretion system domain 199 465 5.1E-106
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 183 570 4.94E-101
Coils Coil Coil - - 171 191 -
Gene3D G3DSA:3.30.300.160 - IPR037257 Type II secretion system protein GspE, N-terminal superfamily 76 166 8.8E-24
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 300 573 6.0E-113
NCBIfam TIGR02533 JCVI: type II secretion system ATPase GspE IPR013369 Type II secretion system protein GspE 88 570 0.0
FunFam G3DSA:3.40.50.300:FF:000398 Type IV pilus assembly ATPase PilB - - 298 572 3.8E-121
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 326 468 1.5E-4
FunFam G3DSA:3.30.450.90:FF:000001 Type II secretion system ATPase GspE - - 166 297 1.3E-55

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.