Pseudomonas stutzeri A1501, PST_0476 (paaC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00725
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00725
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0070403 NAD+ binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02737
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006631 fatty acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02737
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psa01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa00650 Butanoate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa00360 Phenylalanine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF48179 6-phosphogluconate dehydrogenase C-terminal domain-like IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily 410 493 8.5E-16
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 2 184 6.54E-53
Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal 411 494 6.5E-16
SUPERFAMILY SSF48179 6-phosphogluconate dehydrogenase C-terminal domain-like IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily 184 298 1.11E-30
Gene3D G3DSA:1.10.1040.10 - IPR013328 6-phosphogluconate dehydrogenase, domain 2 413 496 5.0E-17
Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding 5 178 2.4E-58
Gene3D G3DSA:3.40.50.720 - - - 1 187 1.6E-62
Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal 185 282 2.6E-27
PANTHER PTHR48075 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN - - 401 492 6.5E-107
FunFam G3DSA:3.40.50.720:FF:000009 Fatty oxidation complex, alpha subunit - - 2 187 6.3E-55
Gene3D G3DSA:1.10.1040.10 - IPR013328 6-phosphogluconate dehydrogenase, domain 2 188 294 6.6E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.