Pseudomonas stutzeri A1501, PST_1287
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF03600
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0015297 | antiporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43269
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF03600
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006814 | sodium ion transport |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43269
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | NF038006 | NCBIFAM: sodium:proton antiporter NhaD | - | - | 29 | 267 | 8.9E-27 |
| Pfam | PF03600 | Citrate transporter | IPR004680 | Citrate transporter-like domain | 10 | 363 | 5.3E-22 |
| PANTHER | PTHR43269 | SODIUM/PROTON ANTIPORTER 1-RELATED | IPR045016 | Na(+)/H(+) antiporter NhaD-like | 7 | 404 | 6.7E-54 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.