Pseudomonas stutzeri A1501, PST_1294
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psa02010 | ABC transporters | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01497 | Periplasmic binding protein | IPR002491 | ABC transporter periplasmic binding domain | 8 | 235 | 6.5E-38 |
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | - | - | 2 | 123 | 5.1E-26 |
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | - | - | 127 | 261 | 3.5E-21 |
| PANTHER | PTHR42860 | VITAMIN B12-BINDING PROTEIN | - | - | 4 | 258 | 2.0E-40 |
| SUPERFAMILY | SSF53807 | Helical backbone metal receptor | - | - | 5 | 258 | 7.46E-49 |
| CDD | cd01144 | BtuF | - | - | 6 | 254 | 9.41268E-69 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.