Pseudomonas stutzeri A1501, PST_1636 (nrdB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.620.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009263 deoxyribonucleotide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01049
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc pyrimidine deoxyribonucleotides biosynthesis from CTP InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc adenosine deoxyribonucleotides <i>de novo</i> biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psa00230 Purine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psa01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa00240 Pyrimidine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF47240 Ferritin-like IPR009078 Ferritin-like superfamily 59 388 5.97E-98
Gene3D G3DSA:1.10.620.20 Ribonucleotide Reductase, subunit A IPR012348 Ribonucleotide reductase-like 68 396 1.1E-99
MobiDBLite mobidb-lite consensus disorder prediction - - 16 33 -
MobiDBLite mobidb-lite consensus disorder prediction - - 1 36 -
PANTHER PTHR23409 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN IPR000358 Ribonucleotide reductase small subunit family 92 410 5.6E-70
CDD cd01049 RNRR2 IPR033909 Ribonucleotide reductase small subunit 95 391 5.6758E-113
FunFam G3DSA:1.10.620.20:FF:000003 Ribonucleoside-diphosphate reductase subunit beta - - 68 396 0.0
PIRSF PIRSF000355 NrdB IPR000358 Ribonucleotide reductase small subunit family 64 415 0.0
Pfam PF00268 Ribonucleotide reductase, small chain IPR000358 Ribonucleotide reductase small subunit family 95 382 2.4E-88

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.