Pseudomonas stutzeri A1501, PST_1742
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR00104 | JCVI: tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | IPR023370 | TrmO-like, N-terminal domain | 3 | 143 | 1.5E-46 |
| Pfam | PF01980 | tRNA-methyltransferase O | IPR023370 | TrmO-like, N-terminal domain | 21 | 138 | 8.3E-45 |
| Pfam | PF18389 | TrmO C-terminal domain | IPR041369 | TrmO, C-terminal | 155 | 216 | 1.2E-16 |
| CDD | cd09281 | UPF0066 | IPR023370 | TrmO-like, N-terminal domain | 7 | 133 | 3.29132E-59 |
| Gene3D | G3DSA:2.40.30.70 | - | IPR036414 | YaeB, N-terminal domain superfamily | 1 | 136 | 5.1E-47 |
| Gene3D | G3DSA:3.30.2310.10 | - | - | - | 137 | 225 | 7.6E-18 |
| PANTHER | PTHR12818 | UNCHARACTERIZED | IPR040372 | YaeB-like | 4 | 228 | 1.2E-65 |
| SUPERFAMILY | SSF118196 | YaeB-like | IPR036413 | YaeB-like superfamily | 2 | 217 | 4.32E-75 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.