Pseudomonas stutzeri A1501, PST_1744
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30047
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0071705 | nitrogen compound transport |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30047
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30047
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR00842 | JCVI: BCCT family transporter | IPR000060 | BCCT transporter family | 60 | 507 | 0.0 |
| Pfam | PF02028 | BCCT, betaine/carnitine/choline family transporter | IPR000060 | BCCT transporter family | 22 | 506 | 0.0 |
| PANTHER | PTHR30047 | HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATED | IPR000060 | BCCT transporter family | 13 | 617 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.