Pseudomonas stutzeri A1501, PST_2671 (cysM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004124 cysteine synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01136
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006535 cysteine biosynthetic process from serine
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01136
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psa01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa00920 Sulfur metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa00270 Cysteine and methionine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00291 Pyridoxal-phosphate dependent enzyme IPR001926 Tryptophan synthase beta chain-like, PALP domain 33 309 3.5E-67
FunFam G3DSA:3.40.50.1100:FF:000003 Cystathionine beta-synthase - - 66 175 2.9E-43
FunFam G3DSA:3.40.50.1100:FF:000029 Cysteine synthase - - 176 317 7.3E-74
SUPERFAMILY SSF53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 24 317 2.62E-92
CDD cd01561 CBS_like - - 37 316 0.0
NCBIfam TIGR01138 JCVI: cysteine synthase B IPR005858 Cysteine synthase CysM 31 320 0.0
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 32 317 1.4E-112
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 63 181 1.4E-112
NCBIfam TIGR01136 JCVI: cysteine synthase IPR005856 Cysteine synthase 33 320 9.3E-125
PANTHER PTHR10314 CYSTATHIONINE BETA-SYNTHASE - - 32 321 4.3E-95

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.