Pseudomonas stutzeri A1501, PST_2682 (srmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 401 415 -
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 224 433 5.6E-50
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 6 220 8.1E-71
PANTHER PTHR47959 ATP-DEPENDENT RNA HELICASE RHLE-RELATED - - 9 382 9.0E-122
Pfam PF00270 DEAD/DEAH box helicase IPR011545 DEAD/DEAH box helicase domain 36 197 2.9E-45
SMART SM00490 helicmild6 IPR001650 Helicase, C-terminal 269 350 1.1E-30
Pfam PF00271 Helicase conserved C-terminal domain IPR001650 Helicase, C-terminal 249 350 4.4E-29
SMART SM00487 ultradead3 IPR014001 Helicase superfamily 1/2, ATP-binding domain 31 233 7.0E-51
CDD cd00268 DEADc - - 23 218 2.53732E-85
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 84 371 2.08E-69
MobiDBLite mobidb-lite consensus disorder prediction - - 389 455 -
CDD cd18787 SF2_C_DEAD - - 230 359 4.51754E-56

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.