Pseudomonas stutzeri A1501, PST_3560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008984 protein-glutamate methylesterase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000156 phosphorelay response regulator activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53335
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00989
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psa02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00996 Glutamate methyltransferase family signature IPR000780 MCP methyltransferase, CheR-type 506 529 1.1E-30
Gene3D G3DSA:3.40.50.180 - IPR035909 Methylesterase CheB, C-terminal 53 248 7.4E-63
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1306 1425 7.12E-35
SMART SM00138 methyl_trans_3 IPR000780 MCP methyltransferase, CheR-type 284 547 9.9E-106
PANTHER PTHR24422 CHEMOTAXIS PROTEIN METHYLTRANSFERASE - - 74 771 9.0E-95
PRINTS PR00996 Glutamate methyltransferase family signature IPR000780 MCP methyltransferase, CheR-type 343 355 1.1E-30
Coils Coil Coil - - 231 251 -
CDD cd17580 REC_2_DhkD-like - - 1310 1421 2.93511E-43
PRINTS PR00996 Glutamate methyltransferase family signature IPR000780 MCP methyltransferase, CheR-type 487 501 1.1E-30
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 814 919 1.58E-10
FunFam G3DSA:3.30.565.10:FF:000006 Sensor histidine kinase WalK - - 1132 1288 1.5E-33
SMART SM00091 pas_2 IPR000014 PAS domain 923 992 0.0022
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1308 1421 2.3E-30
Pfam PF00989 PAS fold IPR013767 PAS fold 593 687 4.9E-5
CDD cd00130 PAS IPR000014 PAS domain 602 700 5.6468E-5
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 1049 1128 1.08E-14
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 907 1034 1.27E-21
SUPERFAMILY SSF47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain - - 278 352 1.57E-12
Pfam PF01739 CheR methyltransferase, SAM binding domain IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal 351 541 1.2E-54
CDD cd00130 PAS IPR000014 PAS domain 810 908 4.05648E-5
Pfam PF08448 PAS fold IPR013656 PAS fold-4 936 1041 7.0E-8
CDD cd00130 PAS IPR000014 PAS domain 936 1036 8.04282E-9
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 594 694 1.57E-6
Pfam PF03705 CheR methyltransferase, all-alpha domain IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal 287 337 1.6E-13
SMART SM00091 pas_2 IPR000014 PAS domain 801 866 0.16
MobiDBLite mobidb-lite consensus disorder prediction - - 27 53 -
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1174 1285 1.7E-21
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 921 1042 1.9E-15
CDD cd16434 CheB-CheR_fusion - - 62 241 1.80705E-94
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 350 546 2.94E-49
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 349 549 1.6E-64
SUPERFAMILY SSF52738 Methylesterase CheB, C-terminal domain IPR035909 Methylesterase CheB, C-terminal 60 244 9.94E-52
SMART SM00091 pas_2 IPR000014 PAS domain 590 655 1.7
Gene3D G3DSA:3.30.450.20 PAS domain - - 789 923 3.3E-14
Gene3D G3DSA:1.10.287.130 - - - 1044 1128 1.1E-16
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1116 1289 6.68E-40
PRINTS PR00996 Glutamate methyltransferase family signature IPR000780 MCP methyltransferase, CheR-type 421 437 1.1E-30
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1173 1287 7.9E-31
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 1059 1127 3.4E-14
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1310 1421 1.4E-23
Gene3D G3DSA:3.30.450.20 PAS domain - - 933 1043 5.6E-21
PRINTS PR00996 Glutamate methyltransferase family signature IPR000780 MCP methyltransferase, CheR-type 385 405 1.1E-30
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1129 1291 2.3E-37
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 1060 1127 2.1E-12
Coils Coil Coil - - 719 788 -
Pfam PF01339 CheB methylesterase IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase 63 238 3.8E-51
Coils Coil Coil - - 1033 1056 -
MobiDBLite mobidb-lite consensus disorder prediction - - 34 53 -
Gene3D G3DSA:3.40.50.2300 - - - 1308 1426 3.3E-36
PRINTS PR00996 Glutamate methyltransferase family signature IPR000780 MCP methyltransferase, CheR-type 306 319 1.1E-30
Pfam PF13596 PAS domain - - 803 908 1.9E-23
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 1057 1123 3.75153E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.