Pseudomonas stutzeri A1501, PST_3745

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00487 ultradead3 IPR014001 Helicase superfamily 1/2, ATP-binding domain 222 435 6.1E-5
NCBIfam TIGR01596 JCVI: CRISPR-associated endonuclease Cas3'' IPR006483 CRISPR-associated Cas3-type HD domain 24 182 2.2E-30
MobiDBLite mobidb-lite consensus disorder prediction - - 1 21 -
CDD cd17930 DEXHc_cas3 - - 242 408 2.59828E-58
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 436 603 4.4E-11
SUPERFAMILY SSF109604 HD-domain/PDEase-like - - 17 181 1.23E-13
Pfam PF01966 HD domain IPR006674 HD domain 26 106 2.1E-6
Gene3D G3DSA:1.10.3210.30 - IPR038257 CRISPR-associated Cas3-type HD domain superfamily 15 133 3.9E-10
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 233 415 1.5E-15
Pfam PF00270 DEAD/DEAH box helicase IPR011545 DEAD/DEAH box helicase domain 248 406 3.6E-8
CDD cd09641 Cas3''_I - - 17 187 3.77408E-33
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 246 556 1.29E-31

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.