Pseudomonas stutzeri A1501, PST_3750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0043571 maintenance of CRISPR repeat elements
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01470
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0051607 defense response to virus
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01470
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01470
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01470
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004519 endonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01470
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004520 endodeoxyribonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03640
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.100.10.20 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain 1 45 1.2E-7
Pfam PF01867 CRISPR associated protein Cas1 IPR002729 CRISPR-associated protein Cas1 2 261 3.5E-95
TIGRFAM TIGR03640 cas1_DVULG: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG IPR019856 CRISPR-associated protein Cas1, DVULG subtype 1 306 0.0
Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. IPR002729 CRISPR-associated protein Cas1 1 292 21.106
CDD cd09721 Cas1_I-C IPR019856 CRISPR-associated protein Cas1, DVULG subtype 1 305 0.0
Gene3D G3DSA:1.20.120.920 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain 47 306 2.7E-77
TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 IPR002729 CRISPR-associated protein Cas1 2 302 6.0E-75

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.