Pseudomonas stutzeri A1501, PST_3859

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 205 387 4.3E-51
SMART SM00267 duf1_3 IPR000160 GGDEF domain 201 386 3.6E-45
CDD cd01949 GGDEF IPR000160 GGDEF domain 214 384 1.41346E-43
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 213 381 5.6E-31
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 89 387 1.7E-57
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 212 385 2.3E-34
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 218 387 9.42E-40
MobiDBLite mobidb-lite consensus disorder prediction - - 321 341 -
Coils Coil Coil - - 304 324 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.