Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0008299 | isoprenoid biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF00348
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | psa01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psa00900 | Terpenoid backbone biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psa01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psa01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF48576 | Terpenoid synthases | IPR008949 | Isoprenoid synthase domain superfamily | 20 | 274 | 8.15E-62 |
SFLD | SFLDS00005 | Isoprenoid Synthase Type I | - | - | 34 | 293 | 0.0 |
Gene3D | G3DSA:1.10.600.10 | Farnesyl Diphosphate Synthase | IPR008949 | Isoprenoid synthase domain superfamily | 14 | 295 | 5.7E-67 |
Pfam | PF00348 | Polyprenyl synthetase | IPR000092 | Polyprenyl synthetase | 41 | 263 | 1.2E-41 |
PANTHER | PTHR43281 | FARNESYL DIPHOSPHATE SYNTHASE | - | - | 20 | 283 | 2.2E-55 |
SFLD | SFLDG01017 | Polyprenyl Transferase Like | - | - | 34 | 293 | 0.0 |
FunFam | G3DSA:1.10.600.10:FF:000001 | Geranylgeranyl diphosphate synthase | - | - | 13 | 296 | 2.5E-77 |