Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_0159 (rpmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00009
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00009
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00009
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psz03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:2.30.170.40:FF:000001 50S ribosomal protein L28 - - 1 57 9.4E-31
PANTHER PTHR13528 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL IPR026569 Large ribosomal subunit protein bL28 2 49 4.6E-13
NCBIfam TIGR00009 JCVI: 50S ribosomal protein L28 IPR001383 Large ribosomal subunit protein bL28, bacterial-type 1 37 3.9E-14
Pfam PF00830 Ribosomal L28 family IPR026569 Large ribosomal subunit protein bL28 2 40 8.4E-16
SUPERFAMILY SSF143800 L28p-like IPR034704 Large ribosomal subunit protein bL28/bL31-like superfamily 1 56 4.12E-20
Gene3D G3DSA:2.30.170.40 Ribosomal protein L28/L24 IPR037147 Large ribosomal subunit protein bL28 superfamily 1 57 7.3E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.