Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006139 | nucleobase-containing compound metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:SM00474
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008408 | 3'-5' exonuclease activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00474
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00279
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003676 | nucleic acid binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00474
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006260 | DNA replication |
Inferred from Sequence Model
Term mapped from: InterPro:SM00482
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003887 | DNA-directed DNA polymerase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00482
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF02739
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006261 | DNA-dependent DNA replication |
Inferred from Sequence Model
Term mapped from: InterPro:PR00868
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | psz00240 | Pyrimidine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psz03420 | Nucleotide excision repair | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psz03410 | Base excision repair | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psz00230 | Purine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psz03030 | DNA replication | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psz01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psz03440 | Homologous recombination | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:1.10.150.20:FF:000003 | DNA polymerase I | - | - | 170 | 265 | 3.6E-26 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 641 | 663 | 2.4E-78 |
Gene3D | G3DSA:3.40.50.1010 | - | - | - | 1 | 169 | 8.5E-54 |
SMART | SM00474 | 35exoneu6 | IPR002562 | 3'-5' exonuclease domain | 315 | 502 | 1.6E-41 |
Gene3D | G3DSA:3.30.420.10 | - | IPR036397 | Ribonuclease H superfamily | 312 | 527 | 1.1E-73 |
CDD | cd09898 | H3TH_53EXO | IPR020045 | DNA polymerase I-like, H3TH domain | 170 | 250 | 2.05951E-28 |
Pfam | PF00476 | DNA polymerase family A | IPR001098 | DNA-directed DNA polymerase, family A, palm domain | 536 | 912 | 0.0 |
PANTHER | PTHR10133 | DNA POLYMERASE I | IPR002298 | DNA polymerase A | 305 | 914 | 0.0 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 664 | 679 | 2.4E-78 |
SUPERFAMILY | SSF56672 | DNA/RNA polymerases | IPR043502 | DNA/RNA polymerase superfamily | 507 | 914 | 0.0 |
SUPERFAMILY | SSF47807 | 5' to 3' exonuclease, C-terminal subdomain | IPR036279 | 5'-3' exonuclease, C-terminal domain superfamily | 168 | 289 | 6.73E-28 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 686 | 709 | 2.4E-78 |
SUPERFAMILY | SSF88723 | PIN domain-like | IPR029060 | PIN-like domain superfamily | 5 | 167 | 2.35E-53 |
NCBIfam | TIGR00593 | JCVI: DNA polymerase I | IPR018320 | DNA polymerase 1 | 6 | 914 | 0.0 |
FunFam | G3DSA:1.20.1060.10:FF:000001 | DNA polymerase I | - | - | 528 | 644 | 2.1E-38 |
Pfam | PF02739 | 5'-3' exonuclease, N-terminal resolvase-like domain | IPR020046 | 5'-3' exonuclease, alpha-helical arch, N-terminal | 6 | 167 | 1.3E-50 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 831 | 847 | 2.4E-78 |
CDD | cd06139 | DNA_polA_I_Ecoli_like_exo | - | - | 330 | 524 | 4.4596E-99 |
Gene3D | G3DSA:1.10.150.20 | - | - | - | 695 | 838 | 1.4E-114 |
SMART | SM00475 | 53exo3 | IPR002421 | 5'-3' exonuclease | 4 | 266 | 1.6E-115 |
CDD | cd09859 | PIN_53EXO | - | - | 8 | 164 | 2.54187E-79 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 716 | 729 | 2.4E-78 |
FunFam | G3DSA:3.40.50.1010:FF:000001 | DNA polymerase I | - | - | 1 | 169 | 1.9E-69 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 777 | 788 | 2.4E-78 |
SMART | SM00482 | polaultra3 | IPR001098 | DNA-directed DNA polymerase, family A, palm domain | 672 | 878 | 1.4E-114 |
FunFam | G3DSA:1.10.150.20:FF:000002 | DNA polymerase I | - | - | 695 | 838 | 4.7E-61 |
SMART | SM00279 | HhH_4 | IPR008918 | Helix-hairpin-helix motif, class 2 | 170 | 205 | 2.5E-12 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 740 | 765 | 2.4E-78 |
Gene3D | G3DSA:1.20.1060.10 | Taq DNA Polymerase; Chain T, domain 4 | - | - | 528 | 644 | 3.9E-36 |
Gene3D | G3DSA:1.10.150.20 | - | - | - | 170 | 264 | 2.4E-24 |
Pfam | PF01612 | 3'-5' exonuclease | IPR002562 | 3'-5' exonuclease domain | 315 | 501 | 1.3E-38 |
Pfam | PF01367 | 5'-3' exonuclease, C-terminal SAM fold | IPR020045 | DNA polymerase I-like, H3TH domain | 168 | 269 | 3.4E-26 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 861 | 874 | 2.4E-78 |
FunFam | G3DSA:3.30.420.10:FF:000026 | DNA polymerase I | - | - | 312 | 527 | 2.6E-94 |
SUPERFAMILY | SSF53098 | Ribonuclease H-like | IPR012337 | Ribonuclease H-like superfamily | 320 | 503 | 1.03E-55 |
Gene3D | G3DSA:3.30.70.370 | - | - | - | 650 | 910 | 1.4E-114 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 799 | 810 | 2.4E-78 |
CDD | cd08637 | DNA_pol_A_pol_I_C | - | - | 533 | 911 | 0.0 |