Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_0484

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000018
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000018
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000018
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS51007 Cytochrome c family profile. IPR009056 Cytochrome c-like domain 30 133 8.827
Gene3D G3DSA:1.10.760.10 IPR036909 Cytochrome c-like domain superfamily 2 143 3.5E-9
Pfam PF00034 Cytochrome c IPR009056 Cytochrome c-like domain 33 132 9.2E-5
Gene3D G3DSA:1.10.760.10 IPR036909 Cytochrome c-like domain superfamily 160 290 2.8E-7
Gene3D G3DSA:1.10.760.10 IPR036909 Cytochrome c-like domain superfamily 291 409 9.2E-18
PIRSF PIRSF000018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit 3 409 0.0
SUPERFAMILY SSF46626 IPR036909 Cytochrome c-like domain superfamily 24 155 3.15E-22
ProSiteProfiles PS51007 Cytochrome c family profile. IPR009056 Cytochrome c-like domain 306 393 8.644
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 311 389 2.2E-7
SUPERFAMILY SSF46626 IPR036909 Cytochrome c-like domain superfamily 298 401 2.3E-16
SUPERFAMILY SSF46626 IPR036909 Cytochrome c-like domain superfamily 167 292 6.04E-17
ProSiteProfiles PS51007 Cytochrome c family profile. IPR009056 Cytochrome c-like domain 175 284 8.344

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.