Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_0490 (spoT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015969 guanosine tetraphosphate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05399
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psz00230 Purine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13328 HD domain - - 26 175 4.7E-50
Pfam PF13291 ACT domain IPR002912 ACT domain 623 699 1.9E-14
PANTHER PTHR21262 GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE - - 4 699 0.0
CDD cd01668 TGS_RSH IPR033655 RelA/SpoT, TGS domain 390 448 9.11618E-31
Gene3D G3DSA:3.30.70.260 - - - 623 702 1.0E-13
CDD cd04876 ACT_RelA-SpoT - - 629 699 1.00513E-16
Pfam PF19296 RelA/SpoT, AH and RIS domains IPR045600 RelA/SpoT, AH and RIS domains 460 545 1.3E-10
SUPERFAMILY SSF81301 Nucleotidyltransferase IPR043519 Nucleotidyltransferase superfamily 181 393 1.8E-60
Pfam PF02824 TGS domain IPR004095 TGS 389 448 1.2E-19
SMART SM00954 RelA_SpoT_2 IPR007685 RelA/SpoT 235 345 7.7E-65
FunFam G3DSA:3.10.20.30:FF:000002 GTP pyrophosphokinase (RelA/SpoT) - - 381 455 5.5E-35
SUPERFAMILY SSF81271 TGS-like IPR012676 TGS-like 376 448 2.83E-22
FunFam G3DSA:1.10.3210.10:FF:000001 GTP pyrophosphokinase RelA - - 3 191 6.8E-86
SUPERFAMILY SSF109604 HD-domain/PDEase-like - - 3 191 4.39E-70
Gene3D G3DSA:3.10.20.30 - IPR012675 Beta-grasp domain superfamily 382 455 5.5E-30
Gene3D G3DSA:1.10.3210.10 Hypothetical protein af1432 - - 2 190 2.0E-71
FunFam G3DSA:3.30.460.10:FF:000001 GTP pyrophosphokinase RelA - - 192 325 3.7E-54
SMART SM00471 hd_13 IPR003607 HD/PDEase domain 41 153 5.6E-8
CDD cd00077 HDc IPR003607 HD/PDEase domain 43 166 2.61118E-5
Pfam PF04607 Region found in RelA / SpoT proteins IPR007685 RelA/SpoT 235 345 3.6E-37
Gene3D G3DSA:3.30.460.10 Beta Polymerase, domain 2 IPR043519 Nucleotidyltransferase superfamily 195 325 2.7E-44
SUPERFAMILY SSF55021 ACT-like IPR045865 ACT-like domain 625 699 1.42E-6
CDD cd05399 NT_Rel-Spo_like IPR007685 RelA/SpoT 210 331 2.10919E-38
NCBIfam TIGR00691 JCVI: RelA/SpoT family protein IPR004811 RelA/SpoT family 26 698 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.