Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.940.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006351 | transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.940.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.940.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | psz03020 | RNA polymerase | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psz01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psz00240 | Pyrimidine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psz00230 | Purine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:3.90.940.10 | - | IPR036161 | RPB6/omega subunit-like superfamily | 2 | 86 | 1.6E-28 |
SMART | SM01409 | RNA_pol_Rpb6_2 | IPR006110 | RNA polymerase, subunit omega/Rpo6/RPB6 | 8 | 61 | 1.7E-18 |
Hamap | MF_00366 | DNA-directed RNA polymerase subunit omega [rpoZ]. | IPR003716 | DNA-directed RNA polymerase, omega subunit | 1 | 62 | 18.245138 |
PANTHER | PTHR34476 | DNA-DIRECTED RNA POLYMERASE SUBUNIT OMEGA | IPR003716 | DNA-directed RNA polymerase, omega subunit | 1 | 84 | 4.6E-24 |
Pfam | PF01192 | RNA polymerase Rpb6 | IPR006110 | RNA polymerase, subunit omega/Rpo6/RPB6 | 8 | 61 | 1.2E-19 |
NCBIfam | TIGR00690 | JCVI: DNA-directed RNA polymerase subunit omega | IPR003716 | DNA-directed RNA polymerase, omega subunit | 1 | 59 | 2.7E-22 |
SUPERFAMILY | SSF63562 | RPB6/omega subunit-like | IPR036161 | RPB6/omega subunit-like superfamily | 1 | 82 | 6.63E-27 |