Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_1415
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM01027 | Beta_Casp_2 | IPR022712 | Beta-Casp domain | 255 | 385 | 7.3E-48 |
| CDD | cd16295 | TTHA0252-CPSF-like_MBL-fold | - | - | 4 | 214 | 8.56508E-102 |
| Pfam | PF07521 | Zn-dependent metallo-hydrolase RNA specificity domain | IPR011108 | Zn-dependent metallo-hydrolase, RNA specificity domain | 399 | 461 | 3.0E-18 |
| Gene3D | G3DSA:3.60.15.10 | - | IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 7 | 440 | 0.0 |
| SMART | SM00849 | Lactamase_B_5a | IPR001279 | Metallo-beta-lactamase | 14 | 239 | 1.8E-21 |
| SUPERFAMILY | SSF56281 | Metallo-hydrolase/oxidoreductase | IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 4 | 469 | 1.08E-126 |
| PANTHER | PTHR11203 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER | - | - | 6 | 467 | 1.3E-91 |
| Gene3D | G3DSA:3.40.50.10890 | - | - | - | 223 | 415 | 0.0 |
| Pfam | PF10996 | Beta-Casp domain | IPR022712 | Beta-Casp domain | 255 | 385 | 4.7E-24 |
| Pfam | PF00753 | Metallo-beta-lactamase superfamily | IPR001279 | Metallo-beta-lactamase | 14 | 212 | 5.0E-16 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.