Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_1416

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR31273
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.920
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016832 aldehyde-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR31273
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.970 - - - 52 412 4.6E-63
PIRSF PIRSF017245 Phosphoketolase IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase 28 804 0.0
SUPERFAMILY SSF52518 Thiamin diphosphate-binding fold (THDP-binding) IPR029061 Thiamin diphosphate-binding fold 85 384 9.77E-18
Gene3D G3DSA:3.40.50.920 - IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II 641 799 4.8E-5
SUPERFAMILY SSF52518 Thiamin diphosphate-binding fold (THDP-binding) IPR029061 Thiamin diphosphate-binding fold 421 619 2.82E-5
Gene3D G3DSA:3.40.50.970 - - - 422 634 1.4E-56
Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase 434 601 3.0E-41
PANTHER PTHR31273 PHOSPHOKETOLASE-RELATED IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase 26 777 0.0
Pfam PF09364 XFP N-terminal domain IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal 64 305 3.7E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.