Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_1442

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006414 translational elongation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00116
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003746 translation elongation factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00116
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46934
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.286.20 - - - 182 230 9.9E-44
FunFam G3DSA:1.10.286.20:FF:000001 Elongation factor Ts - - 182 229 1.8E-16
Hamap MF_00050 Elongation factor Ts [tsf]. IPR001816 Translation elongation factor EFTs/EF1B 1 282 71.748802
Gene3D G3DSA:1.10.8.10 - - - 1 55 8.4E-21
Gene3D G3DSA:3.30.479.20 Elongation factor Ts, dimerisation domain IPR036402 Elongation factor Ts, dimerisation domain superfamily 56 141 8.9E-17
CDD cd14275 UBA_EF-Ts - - 7 42 2.4717E-13
FunFam G3DSA:1.10.8.10:FF:000001 Elongation factor Ts - - 1 56 3.2E-25
Pfam PF00889 Elongation factor TS IPR014039 Translation elongation factor EFTs/EF1B, dimerisation 71 265 2.1E-59
NCBIfam TIGR00116 JCVI: translation elongation factor Ts IPR001816 Translation elongation factor EFTs/EF1B 1 282 9.8E-98
SUPERFAMILY SSF54713 Elongation factor Ts (EF-Ts), dimerisation domain IPR036402 Elongation factor Ts, dimerisation domain superfamily 142 282 8.9E-50
SUPERFAMILY SSF54713 Elongation factor Ts (EF-Ts), dimerisation domain IPR036402 Elongation factor Ts, dimerisation domain superfamily 56 139 2.84E-14
PANTHER PTHR11741 ELONGATION FACTOR TS IPR001816 Translation elongation factor EFTs/EF1B 5 273 1.2E-69
SUPERFAMILY SSF46934 UBA-like IPR009060 UBA-like superfamily 4 54 2.41E-16
Gene3D G3DSA:3.30.479.20 Elongation factor Ts, dimerisation domain IPR036402 Elongation factor Ts, dimerisation domain superfamily 146 264 9.9E-44

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.