Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:1.10.10.60 | - | - | - | 213 | 316 | 6.4E-24 |
SMART | SM00342 | aracneu4 | IPR018060 | DNA binding HTH domain, AraC-type | 227 | 313 | 2.5E-23 |
PANTHER | PTHR46796 | HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED | - | - | 37 | 315 | 1.8E-37 |
Pfam | PF12833 | Helix-turn-helix domain | IPR018060 | DNA binding HTH domain, AraC-type | 233 | 315 | 3.4E-21 |
SUPERFAMILY | SSF51215 | Regulatory protein AraC | IPR037923 | Transcription regulator HTH-like | 74 | 130 | 1.18E-5 |
SUPERFAMILY | SSF46689 | Homeodomain-like | IPR009057 | Homeobox-like domain superfamily | 214 | 262 | 1.62E-9 |
Pfam | PF14525 | AraC-binding-like domain | IPR035418 | Transcription regulator HTH, AraC- type, ligand binding domain-like | 21 | 191 | 1.0E-21 |