Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3809
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 361 | 381 | - |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 210 | 427 | 1.5E-57 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 254 | 424 | 1.18474E-43 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 245 | 427 | 4.3E-51 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 258 | 427 | 1.02E-39 |
| Coils | Coil | Coil | - | - | 344 | 364 | - |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 252 | 425 | 5.0E-34 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 241 | 426 | 2.7E-45 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 253 | 421 | 4.2E-31 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.