Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0016117 | carotenoid biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02734
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016491 | oxidoreductase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF01593
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | psz01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psz00906 | Carotenoid biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psz01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF01593 | Flavin containing amine oxidoreductase | IPR002937 | Amine oxidase | 19 | 494 | 4.2E-40 |
NCBIfam | TIGR02734 | JCVI: phytoene desaturase family protein | IPR014105 | Carotenoid/retinoid oxidoreductase | 11 | 499 | 0.0 |
Gene3D | G3DSA:3.50.50.60 | - | IPR036188 | FAD/NAD(P)-binding domain superfamily | 455 | 505 | 2.9E-7 |
Gene3D | G3DSA:3.50.50.60 | - | IPR036188 | FAD/NAD(P)-binding domain superfamily | 8 | 99 | 4.5E-28 |
Gene3D | G3DSA:3.50.50.60 | - | IPR036188 | FAD/NAD(P)-binding domain superfamily | 203 | 330 | 5.1E-25 |
SUPERFAMILY | SSF51905 | FAD/NAD(P)-binding domain | IPR036188 | FAD/NAD(P)-binding domain superfamily | 10 | 498 | 1.01E-71 |
PANTHER | PTHR43734 | PHYTOENE DESATURASE | - | - | 1 | 497 | 0.0 |
FunFam | G3DSA:3.50.50.60:FF:000413 | Phytoene desaturase (lycopene-forming) | - | - | 202 | 322 | 1.0E-44 |
FunFam | G3DSA:3.50.50.60:FF:000378 | Phytoene desaturase | - | - | 8 | 100 | 6.6E-42 |