Pseudomonas stutzeri DSM 4166, PSTAA_1382 (nifU)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06664
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06664
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016226 iron-sulfur cluster assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06664
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.300.130 - IPR034904 Fe-S cluster assembly domain superfamily 233 312 1.2E-21
Gene3D G3DSA:3.90.1010.10 - - - 1 135 2.0E-46
CDD cd19947 NifU_Fer2_BFD-like - - 132 183 4.98375E-26
PIRSF PIRSF000375 NifU IPR016217 Nitrogen fixation, NifU 1 306 1.3E-130
Pfam PF04324 BFD-like [2Fe-2S] binding domain IPR007419 BFD-like [2Fe-2S]-binding domain 135 183 1.7E-16
NCBIfam TIGR02000 JCVI: Fe-S cluster assembly protein NifU IPR010238 NIF system FeS cluster assembly, NifU 1 305 0.0
SUPERFAMILY SSF82649 SufE/NifU - - 2 131 4.45E-42
Gene3D G3DSA:1.10.10.1100 - IPR041854 BFD-like [2Fe-2S]-binding domain superfamily 136 188 8.0E-9
Pfam PF01592 NifU-like N terminal domain IPR002871 NIF system FeS cluster assembly, NifU, N-terminal 4 125 7.6E-50
SUPERFAMILY SSF117916 Fe-S cluster assembly (FSCA) domain-like IPR034904 Fe-S cluster assembly domain superfamily 230 309 2.45E-22
CDD cd06664 IscU_like IPR002871 NIF system FeS cluster assembly, NifU, N-terminal 4 117 7.73768E-44
Pfam PF01106 NifU-like domain IPR001075 NIF system FeS cluster assembly, NifU, C-terminal 239 303 1.2E-22
PANTHER PTHR10093 IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG IPR002871 NIF system FeS cluster assembly, NifU, N-terminal 4 168 1.7E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.