Pseudomonas stutzeri DSM 4166, PSTAA_1390 (clpX-1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006457 protein folding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0140662 ATP-dependent protein folding chaperone
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046983 protein dimerization activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00994
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00994
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07724
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051082 unfolded protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 111 282 2.6E-9
Gene3D G3DSA:1.10.8.60 - - - 314 415 2.8E-28
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 59 391 6.39E-55
SUPERFAMILY SSF57716 Glucocorticoid receptor-like (DNA-binding domain) - - 7 42 6.99E-7
SMART SM01086 ClpB_D2_small_2 IPR019489 Clp ATPase, C-terminal 315 407 7.8E-27
Pfam PF06689 ClpX C4-type zinc finger IPR010603 Zinc finger, ClpX C4-type 8 42 5.8E-10
NCBIfam TIGR00382 JCVI: ATP-dependent protease ATP-binding subunit ClpX IPR004487 Clp protease, ATP-binding subunit ClpX 4 397 0.0
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 52 313 8.4E-89
FunFam G3DSA:1.10.8.60:FF:000002 ATP-dependent Clp protease ATP-binding subunit ClpX - - 314 407 1.2E-29
PANTHER PTHR48102 ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED - - 46 397 3.7E-126
Gene3D G3DSA:6.20.220.10 - IPR038366 Zinc finger, ClpX C4-type superfamily 1 44 3.6E-8
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 315 391 1.0E-13
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 111 309 8.8E-44
SMART SM00994 zf_C4_ClpX_2 IPR010603 Zinc finger, ClpX C4-type 6 45 7.1E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.