Pseudomonas stutzeri DSM 4166, PSTAA_2448 (trbB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02782
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02782
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psr02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30486 TWITCHING MOTILITY PROTEIN PILT - - 10 301 7.1E-57
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 9 271 3.52E-36
CDD cd01130 VirB11-like_ATPase - - 121 288 2.93923E-64
Gene3D G3DSA:3.30.450.90 - - - 2 103 9.0E-18
Pfam PF00437 Type II/IV secretion system protein IPR001482 Type II/IV secretion system domain 12 254 8.0E-51
NCBIfam TIGR02782 JCVI: P-type conjugative transfer ATPase TrbB IPR014149 Conjugative transfer, TrbB 1 296 5.9E-125
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 106 311 1.1E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.