Pseudomonas stutzeri DSM 4166, PSTAA_3962

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008649 rRNA methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04378
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0070475 rRNA base methylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04378
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. IPR007473 Ribosomal RNA large subunit methyltransferase J 1 265 39.565
Gene3D G3DSA:3.40.50.150 1 279 1.1E-104
Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IPR007473 Ribosomal RNA large subunit methyltransferase J 32 275 2.0E-101
SUPERFAMILY SSF53335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase 8 274 3.29E-88

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.