Pseudomonas stutzeri DSM 4166, PSTAA_3966

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0016117 carotenoid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02734
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01593
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psr01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psr01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psr00906 Carotenoid biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 8 99 4.1E-28
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 10 498 5.3E-72
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 455 504 4.9E-7
Pfam PF01593 Flavin containing amine oxidoreductase IPR002937 Amine oxidase 19 494 1.0E-39
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 203 330 5.7E-25
NCBIfam TIGR02734 JCVI: phytoene desaturase family protein IPR014105 Carotenoid/retinoid oxidoreductase 11 498 0.0
PANTHER PTHR43734 PHYTOENE DESATURASE - - 1 497 0.0
FunFam G3DSA:3.50.50.60:FF:000378 Phytoene desaturase - - 8 100 6.8E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.