Pseudomonas stutzeri DSM 4166, PSTAA_3967

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01790
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016117 carotenoid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01790
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0045436 lycopene beta cyclase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01789
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psr01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psr01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psr00906 Carotenoid biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05834 Lycopene cyclase protein - - 6 374 4.9E-93
NCBIfam TIGR01790 JCVI: lycopene cyclase family protein IPR010108 Lycopene cyclase, beta/epsilon 6 374 8.1E-104
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 1 231 7.5E-6
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 2 335 1.73E-19
NCBIfam TIGR01789 JCVI: lycopene beta-cyclase CrtY IPR008461 Lycopene cyclase 6 375 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.