Pseudomonas stutzeri DSM 4166, PSTAA_4052
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006313 | transposition, DNA-mediated |
Inferred from Sequence Model
Term mapped from: InterPro:PF01526
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0004803 | transposase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF01526
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Coils | Coil | Coil | - | - | 296 | 316 | - |
| NCBIfam | NF033527 | NCBIFAM: Tn3 family transposase | IPR047653 | Tn3-like transposase | 22 | 976 | 0.0 |
| Pfam | PF01526 | Tn3 transposase DDE domain | IPR002513 | Tn3 transposase DDE domain | 585 | 974 | 0.0 |
| Pfam | PF13700 | Domain of unknown function (DUF4158) | IPR025296 | Domain of unknown function DUF4158 | 5 | 170 | 1.1E-50 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.