Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 45 | 56 | 5.3E-9 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 5 | 88 | 4.6E-23 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 167 | 264 | 4.7E-35 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 91 | 295 | 8.6E-33 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 92 | 298 | 3.26E-32 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 11 | 68 | 9.9E-22 |
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 9 | 298 | 1.0E-63 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 5 | 84 | 1.5E-22 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 35 | 45 | 5.3E-9 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 6 | 90 | 6.0E-21 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 98 | 289 | 4.7E-35 |
CDD | cd08432 | PBP2_GcdR_TrpI_HvrB_AmpR_like | - | - | 94 | 291 | 1.87344E-46 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 24 | 35 | 5.3E-9 |