Pseudomonas stutzeri DSM 4166, PSTAA_4078

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF006648
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF006648
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF006648
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0140359 ABC-type transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF006648
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43332 INNER MEMBRANE TRANSPORT PERMEASE YADH-RELATED - - 2 253 1.1E-101
PRINTS PR00164 ABC-2 type transport system membrane protein signature IPR000412 ABC-2 transporter 193 212 5.7E-15
PRINTS PR00164 ABC-2 type transport system membrane protein signature IPR000412 ABC-2 transporter 173 192 5.7E-15
PRINTS PR00164 ABC-2 type transport system membrane protein signature IPR000412 ABC-2 transporter 136 160 5.7E-15
Pfam PF01061 ABC-2 type transporter IPR013525 ABC-2 type transporter, transmembrane domain 5 216 1.3E-28
PIRSF PIRSF006648 DrrB IPR000412 ABC-2 transporter 4 250 8.9E-31
PRINTS PR00164 ABC-2 type transport system membrane protein signature IPR000412 ABC-2 transporter 55 77 5.7E-15
PRINTS PR00164 ABC-2 type transport system membrane protein signature IPR000412 ABC-2 transporter 99 124 5.7E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.