Pseudomonas stutzeri CCUG 29243, A458_02065

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00924
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00924
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF50182 Sm-like ribonucleoproteins IPR010920 LSM domain superfamily 903 968 3.27E-17
Gene3D G3DSA:3.30.70.100 - - - 971 1064 5.2E-23
MobiDBLite mobidb-lite consensus disorder prediction - - 27 60 -
SUPERFAMILY SSF82861 Mechanosensitive channel protein MscS (YggB), transmembrane region IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 817 901 1.15E-7
Pfam PF12795 Mechanosensitive ion channel porin domain IPR024393 Mechanosensitive ion channel MscS, porin domain 37 259 1.2E-54
Pfam PF00924 Mechanosensitive ion channel IPR006685 Mechanosensitive ion channel MscS 860 1059 5.7E-56
Coils Coil Coil - - 217 240 -
Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 IPR025692 Mechanosensitive ion channel inner membrane domain 1 480 799 9.3E-100
Coils Coil Coil - - 396 416 -
MobiDBLite mobidb-lite consensus disorder prediction - - 1078 1097 -
SUPERFAMILY SSF82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain IPR011066 Mechanosensitive ion channel MscS, C-terminal 970 1070 1.16E-26
FunFam G3DSA:1.10.287.1260:FF:000002 Potassium efflux system KefA - - 816 917 2.9E-38
Coils Coil Coil - - 49 90 -
Gene3D G3DSA:2.30.30.60 - IPR023408 Mechanosensitive ion channel MscS, beta-domain superfamily 918 967 1.2E-13
PANTHER PTHR30347 POTASSIUM CHANNEL RELATED - - 544 1089 0.0
Gene3D G3DSA:1.10.287.1260 - - - 816 917 2.7E-12
Coils Coil Coil - - 104 124 -
FunFam G3DSA:2.30.30.60:FF:000001 MscS Mechanosensitive ion channel - - 918 966 1.7E-17
Coils Coil Coil - - 273 314 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.