Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0010181 | FMN binding |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF003314
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016491 | oxidoreductase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF01070
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0004452 | isopentenyl-diphosphate delta-isomerase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF003314
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0008299 | isoprenoid biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF003314
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | psc00900 | Terpenoid backbone biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psc01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | <i>trans, trans</i>-farnesyl diphosphate biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG | psc01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | methylerythritol phosphate pathway II | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | mevalonate pathway III (archaea) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG | psc01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | <i>all-trans</i>-farnesol biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | mevalonate pathway II (archaea) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | isoprene biosynthesis II (engineered) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | bisabolene biosynthesis (engineered) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | mevalonate pathway I | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
NCBIfam | TIGR02151 | JCVI: type 2 isopentenyl-diphosphate Delta-isomerase | IPR011179 | Isopentenyl-diphosphate delta-isomerase, FMN-dependent | 9 | 341 | 1.1E-116 |
SUPERFAMILY | SSF51395 | FMN-linked oxidoreductases | - | - | 29 | 343 | 2.89E-70 |
PIRSF | PIRSF003314 | IPP_isomerase_FMN-dep | IPR011179 | Isopentenyl-diphosphate delta-isomerase, FMN-dependent | 3 | 345 | 1.5E-121 |
CDD | cd02811 | IDI-2_FMN | IPR011179 | Isopentenyl-diphosphate delta-isomerase, FMN-dependent | 9 | 337 | 0.0 |
Hamap | MF_00354 | Isopentenyl-diphosphate delta-isomerase [fni]. | IPR011179 | Isopentenyl-diphosphate delta-isomerase, FMN-dependent | 6 | 346 | 39.806145 |
Pfam | PF01070 | FMN-dependent dehydrogenase | IPR000262 | FMN-dependent dehydrogenase | 178 | 339 | 3.3E-18 |
PANTHER | PTHR43665 | ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE | IPR011179 | Isopentenyl-diphosphate delta-isomerase, FMN-dependent | 1 | 341 | 2.2E-116 |
Gene3D | G3DSA:3.20.20.70 | Aldolase class I | IPR013785 | Aldolase-type TIM barrel | 4 | 345 | 2.0E-114 |