Pseudomonas stutzeri CCUG 29243, A458_02185

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005515	protein binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00065	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Coils	Coil	Coil	-	-	135	158	-
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	345	451	9.6E-20
CDD	cd00130	PAS	IPR000014	PAS domain	38	103	0.00314166
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	250	877	0.0
CDD	cd01948	EAL	IPR001633	EAL domain	638	875	3.54248E-97
Pfam	PF00563	EAL domain	IPR001633	EAL domain	638	873	5.3E-73
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	37	103	5.76E-5
Gene3D	G3DSA:3.30.450.40	-	IPR029016	GAF-like domain superfamily	161	337	3.9E-22
SMART	SM00091	pas_2	IPR000014	PAS domain	14	87	48.0
SMART	SM00065	gaf_1	IPR003018	GAF domain	186	336	1.5E-10
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	637	886	4.32E-87
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	340	458	1.1E-13
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	32	112	1.1E-5
FunFam	G3DSA:3.20.20.450:FF:000001	Cyclic di-GMP phosphodiesterase yahA	-	-	633	888	4.2E-94
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	453	622	5.3E-49
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	464	618	4.9E-37
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	460	621	1.6E-35
SMART	SM00052	duf2_2	IPR001633	EAL domain	632	878	4.5E-112
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	465	620	2.75364E-51
Pfam	PF01590	GAF domain	IPR003018	GAF domain	189	325	2.2E-13
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	635	886	1.3E-96
SUPERFAMILY	SSF55781	GAF domain-like	-	-	189	333	2.84E-21
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	339	463	1.6E-24
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	469	623	1.02E-39
CDD	cd00130	PAS	IPR000014	PAS domain	348	450	4.7703E-9
SMART	SM00086	pac_2	IPR001610	PAC motif	411	453	2.9E-5
SMART	SM00091	pas_2	IPR000014	PAS domain	339	405	8.4E-5
Pfam	PF13426	PAS domain	IPR000014	PAS domain	351	451	4.8E-12
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	464	634	3.3E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.