Pseudomonas stutzeri CCUG 29243, A458_03710
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 116 | 137 | 3.6 |
| NCBIfam | TIGR04247 | JCVI: nitrous oxide reductase family maturation protein NosD | IPR026464 | Nitrous oxide reductase family maturation protein NosD | 43 | 422 | 0.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 86 | 114 | 1600.0 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 46 | 410 | 5.68E-55 |
| Pfam | PF05048 | Periplasmic copper-binding protein (NosD) | IPR007742 | Periplasmic copper-binding protein NosD, beta helix domain | 145 | 358 | 9.6E-51 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 278 | 357 | 2.5E-6 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 138 | 167 | 1100.0 |
| SMART | SM00722 | complete | IPR006633 | Carbohydrate-binding/sugar hydrolysis domain | 194 | 369 | 1.0E-29 |
| SMART | SM00722 | complete | IPR006633 | Carbohydrate-binding/sugar hydrolysis domain | 48 | 188 | 1.3E-21 |
| NCBIfam | TIGR03804 | JCVI: parallel beta-helix repeat (two copies) | IPR022441 | Parallel beta-helix repeat-2 | 162 | 201 | 2.0E-5 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 294 | 315 | 24.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 234 | 256 | 1200.0 |
| NCBIfam | TIGR03804 | JCVI: parallel beta-helix repeat (two copies) | IPR022441 | Parallel beta-helix repeat-2 | 290 | 331 | 1.4E-5 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 212 | 233 | 5900.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 168 | 189 | 0.87 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 190 | 211 | 2700.0 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 58 | 277 | 5.9E-21 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 317 | 355 | 5600.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.