Pseudomonas stutzeri CCUG 29243, A458_08200

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004733 pyridoxamine-phosphate oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00558
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0010181 FMN binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00558
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008615 pyridoxine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00558
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psc00750 Vitamin B6 metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc pyridoxal 5'-phosphate salvage II (plants) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psc01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.30.110.10 - IPR012349 FMN-binding split barrel 2 215 1.3E-83
NCBIfam TIGR00558 JCVI: pyridoxamine 5'-phosphate oxidase IPR000659 Pyridoxamine 5'-phosphate oxidase 25 215 1.5E-79
PIRSF PIRSF000190 Pyd_amn-ph_oxd IPR000659 Pyridoxamine 5'-phosphate oxidase 1 215 7.9E-82
SUPERFAMILY SSF50475 FMN-binding split barrel - - 8 215 4.09E-67
PANTHER PTHR10851 PYRIDOXINE-5-PHOSPHATE OXIDASE IPR000659 Pyridoxamine 5'-phosphate oxidase 5 215 1.4E-73
Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal 175 215 1.5E-18
FunFam G3DSA:2.30.110.10:FF:000011 Chromosome 7, whole genome shotgun sequence - - 14 215 3.1E-94
Coils Coil Coil - - 143 163 -
Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. IPR000659 Pyridoxamine 5'-phosphate oxidase 11 215 39.009239
Pfam PF01243 Pyridoxamine 5'-phosphate oxidase IPR011576 Pyridoxamine 5'-phosphate oxidase, putative 40 122 2.5E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.