Pseudomonas stutzeri CCUG 29243, A458_19235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006744 ubiquinone biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR38683
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR38683
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008813 chorismate lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR38683
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psc01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psc00130 Ubiquinone and other terpenoid-quinone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. IPR007440 Chorismate--pyruvate lyase 5 174 26.332523
PANTHER PTHR38683 CHORISMATE PYRUVATE-LYASE IPR007440 Chorismate--pyruvate lyase 6 177 2.6E-48
Pfam PF04345 Chorismate lyase IPR007440 Chorismate--pyruvate lyase 6 175 6.8E-52
SUPERFAMILY SSF64288 Chorismate lyase-like IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 5 173 4.24E-49
Gene3D G3DSA:3.40.1410.10 - IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 4 172 2.1E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.