Pseudomonas stutzeri CCUG 29243, A458_20670

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02120
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02120
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psc03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.81.30 Type II secretion system (T2SS), domain F IPR042094 Type II secretion system GspF domain superfamily 55 172 2.0E-27
Pfam PF00482 Type II secretion system (T2SS), protein F IPR018076 Type II secretion system protein GspF domain 71 193 2.2E-29
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 384 403 1.2E-35
PANTHER PTHR30012 GENERAL SECRETION PATHWAY PROTEIN IPR003004 GspF/PilC family 1 403 1.2E-125
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 368 382 1.2E-35
Pfam PF00482 Type II secretion system (T2SS), protein F IPR018076 Type II secretion system protein GspF domain 273 395 6.3E-28
FunFam G3DSA:1.20.81.30:FF:000001 Type II secretion system protein F - - 56 172 9.7E-36
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 165 193 1.2E-35
Gene3D G3DSA:1.20.81.30 Type II secretion system (T2SS), domain F IPR042094 Type II secretion system GspF domain superfamily 256 368 5.8E-29
FunFam G3DSA:1.20.81.30:FF:000001 Type II secretion system protein F - - 257 371 1.2E-32
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 66 78 1.2E-35
NCBIfam TIGR02120 JCVI: type II secretion system inner membrane protein GspF IPR011850 Type II secretion system protein GspF 4 403 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.