Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SMART | SM00342 | aracneu4 | IPR018060 | DNA binding HTH domain, AraC-type | 163 | 245 | 2.5E-25 |
Gene3D | G3DSA:1.10.10.60 | - | - | - | 146 | 206 | 1.2E-10 |
CDD | cd06124 | cupin_NimR-like_N | - | - | 8 | 102 | 1.4309E-40 |
Pfam | PF12833 | Helix-turn-helix domain | IPR018060 | DNA binding HTH domain, AraC-type | 169 | 246 | 1.3E-22 |
Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | IPR014710 | RmlC-like jelly roll fold | 10 | 92 | 4.0E-9 |
PANTHER | PTHR11019 | HTH-TYPE TRANSCRIPTIONAL REGULATOR NIMR | - | - | 2 | 246 | 1.0E-79 |
Gene3D | G3DSA:1.10.10.60 | - | - | - | 207 | 249 | 1.1E-9 |
Pfam | PF02311 | AraC-like ligand binding domain | IPR003313 | AraC-type arabinose-binding/dimerisation domain | 17 | 123 | 3.1E-14 |
FunFam | G3DSA:1.10.10.60:FF:000132 | AraC family transcriptional regulator | - | - | 144 | 248 | 1.8E-36 |
SUPERFAMILY | SSF46689 | Homeodomain-like | IPR009057 | Homeobox-like domain superfamily | 200 | 246 | 4.3E-9 |
SUPERFAMILY | SSF51182 | RmlC-like cupins | IPR011051 | RmlC-like cupin domain superfamily | 15 | 172 | 1.07E-20 |